Index

A

aggregate_guide_lfcs() (in module gnt.score)

B

build_anchor_df() (in module gnt.score)

C

calc_dlfc() (in module gnt.score) check_guide_input() (in module gnt.score)

check_min_guide_pairs() (in module gnt.score) combine_z_scores() (in module gnt.score)

F

filter_anchor_base_scores() (in module gnt.score)

fit_anchor_model() (in module gnt.score) fit_models() (in module gnt.score)

G

get_avg_score() (in module gnt.score) get_base_lfc_from_dlfc() (in module gnt.score) get_base_lfc_from_resid() (in module gnt.score) get_base_score() (in module gnt.score) get_gene_dlfcs() (in module gnt.score) get_gene_residuals() (in module gnt.score) get_guide_dlfcs() (in module gnt.score)

get_guide_residuals() (in module gnt.score) get_no_control_guides() (in module gnt.score) get_pop_stats() (in module gnt.score) get_removed_guides_genes() (in module gnt.score) gnt (module) gnt.cli (module) gnt.score (module)

J

join_anchor_base_score() (in module gnt.score)

M

melt_df() (in module gnt.score) model_fixed_slope() (in module gnt.score)

model_linear() (in module gnt.score) model_quadratic() (in module gnt.score) model_spline() (in module gnt.score)

O

order_cols() (in module gnt.score)

order_cols_with_meta() (in module gnt.score)

R

remove_guides() (in module gnt.score)

W

warn_no_control_guides() (in module gnt.score)